Fernando Peruani
Publications:
[in Googlescholar]
(if a link of a submitted manuscript does not work, and you are interested in the subject, please, send me an email and I will send you the PDF).
Reversible adhesion by type IV pili leads to the formation of permanent localized clusters.
M. Pepe, C. Dea, D. Genkowsky, D. Capasso, M. Roset, A. Jager, F. Peruani, A. Kierbel
iScience 105532 (2022) [pdf]
Intermittent collective motion in sheep results from alternating the role of leader and follower.
L. Gomez Nava, R. Bon, F. Peruani
Nature Physics 18 (2022) [pdf]
[Read the News and Views by Cristian Huepe: here,
the comment by Ingrid Fadelli in Phys.Org
here
 The article was covered in several news outlets, including Le Monde
here,
La Vanguardia
here,
among many others.
Cooperation of two opposite flagella allows highspeed swimming and active turning in zoospore
Q. Tran, E. Galiana, P. Thomen, C. Cohen, F. Orange, F. Peruani, X. Noblin
eLife 11, e71227 (2022) [pdf]
Vectorial active matter on the lattice: emergence of condensates and nematic bands in an active zerorange process
J. NavaSedeno, L. Brusch, A. Deutsch, H. Hatzikirou, A. VossBoehme, F. Peruani
submitted (2022) [pdf]
Statistics of pathogenic bacteria in the search of host cells.
S. Otte, E. PerezIpina, R. PointerBres, D. Czerucka, F. Peruani
Nature Communications Nature Communications 12, 1990 (2021) [pdf]
Revisiting the emergence of order in active matter
O. Chepizhko, D. Saintillan, F. Peruani
Soft Matter 17, 31133120 (2021) [pdf]
Identifying interaction neighbors in animal groups
H. Gascuel, F. Peruani, and R. Bon
Animal Behaviour 174, 97104 (2021) [pdf]
A particlefield representation unifies paradigms in active matter
R. Grossmann, I. Aranson, and F. Peruani
Nature Communications 11, 5365 (2020) [pdf]
A novel approach to chemotaxis: active particles guided by internal clocks
L. GomezNava, R. Grossmann, M. Hintsche, C. Beta, F. Peruani
Europhysics Letters 130, 68002 (2020) [pdf]
Learning to flock through reinforcement
M. Durve, F. Peruani, A. Celani
Phys. Rev. E 102 (1), 012601 (2020) [pdf]
Modelling cell motion: are on and offlattice models equivalent?
J. NavaSedeno, A. VossBoehme, H. HatzikirouL,A. Deutsch, F. Peruani
Phil. Trans. R. Soc. B 375 (1807), 20190378 (2020) [pdf]
Flocking in Complex Environments  Attention tradeoffs in collective information processing
P. Rahmani, F. Peruani, and P. Romanczuk
PloS Comp. Biol. 16(4), e1007697. (2020) [pdf]
SelfPropelled Rods: Insights and Perspectives for Active Matter
M. Bär , R. Grossmann, S. Heidenreich, and F. Peruani
Annu. Rev. Condens. Matter Phys 11, 441466 (2020) [pdf]
The 2020 motile active matter roadmap
G. Gompper et al.
contributed section: selforganized collective patterns in active matter, J. Phys.: Condens. Matter 32, 193001 (2020) [pdf]
Phase separation and emergence of collective motion in a onedimensional system of active particles
L. Barberis, F. Peruani
Journal of Chemical Physics 150, 144905 (2019) [pdf]
Bacteria display optimal transport near surfaces
E. Perez Ipina, S. Otte, R. PontierBres, R. Czerucka, F. Peruani
Nature Physics 15, 610615 (2019) [pdf]
[Read the Synopsis by Ingrid Fadelli in Phys.Org : here  The article was covered in a news outlet: here. See also UCA's synopsis: here ]
Reaction processes among selfpropelled particles
F. Peruani, G. Sibona
Soft Matter 15, 497503 (2019) [pdf]
An ant navigation model based on Weber's law
P. Amorim, T. Goudon, F. Peruani
Journal of Mathematical Biology (2019) [pdf]
Cold Active Matter:
How time independent disorder affects the motion of selfpropelled particles
F. Peruani, I. Aranson
Phys. Rev. Lett. 120, 238101 (2018) [pdf]
[selected by Phys. Rev. Lett. as ``Editor's suggestion'']
Markov robots: minimal navigation strategies for active particles
L. Gomez Nava, R. Grossmann, F. Peruani
Phys. Rev. 97, 042604 (2018) [pdf]
A polar bundle of flagella can drive bacterial swimming by pushing, pulling, or coiling around the cell body
M. Hintsche, V. Waljor, R. Grossmann, Marco J. Kuhn, K.M. Thormann, F. Peruani, C. Beta
Scientific Reports 7, 16771 (2017) [pdf]
Hydrodynamic equations for flocking models without velocity alignment
F. Peruani
J. Phys. Soc. Jpn. 86, 101010 (2017) [pdf]
Extracting cellular automaton rules from physical Langevin equation models for single and collective cell migration
J.M. NavaSedeño, H. Hatzikirou, F. Peruani, A. Deutsch
Journal of Mathematical Biology, 126 (2017) [pdf]
Largescale patterns in a minimal cognitive flocking model: incidental leaders, nematic patterns, and aggregates
L. Barberis, F. Peruani
Phys. Rev. Lett. 117, 248001 (2016) [pdf]
[Read the Synopsis: "Flocks Without Memory" by Matteo Rini in Physics here  the article was covered in other news outlets as well, e.g. here ]
Pattern formation of selfpropelled rods with directional reversal
R. Grossmann, F. Peruani, M. Bär
Phys. Rev. E 94, 050602(R) (2016) [pdf]
Superdiffusion, largescale synchronization, and topological defects
R. Grossmann, F. Peruani, M. Bär
Phys. Rev. E 93, 040102(R) (2016) [pdf]
Active Brownian Rods
F. Peruani
Eur. Phys. J. Spec. Top. 225, 2301 (2016)[pdf]
Diffusion properties of active particles with directional reversal
R. Grossmann, F. Peruani, M. Bär
New J. Phys. 18 043009 (2016) [pdf]
[Read a Perspective on this work by Carsten Beta here ]
Intermittent collective dynamics emerge from conflicting imperatives in sheep herds
F. Ginelli*, F. Peruani*, MH. Pillot, H. Chate, G. Theraulaz, R. Bon
Proc. Nat. Acad. Sci 112, 1272912734 (2015) [html]
[The work received coverage in the media, see here]
Imitation combined with a characteristic stimulus duration results in a robust collective decisionmaking in sheep
S. Toulet, J. Gautrais, R. Bon, F. Peruani
PLoS ONE 10(10): e0140188 (2015) [html]
Selfpropelled rods exhibit a novel phaseseparated state characterized by the presence of active stresses and the ejection of polar clusters
S. Weitz, A. Deutsch, F. Peruani
Phys. Rev. E 92, 012322 (2015) [pdf]
Autoorganisation et agreégation cellulaire sans chimiotactisme
A. Chauvière, F. Peruani
In: Le vivant critique et chaotique, Ed. A. Stéphanou (2015) [pdf]
Active particles in heterogeneous media display new physics: existence of optimal noise and absence of bands and longrange order
O. Chepizhko, F. Peruani
Eur. Phys. J. Special Topics 224, 12871302 (2015) [pdf]
A geometric approach to selfpropelled motion in isotropic & anisotropic environments
R. Grossmann, F. Peruani, M. Bär
Eur. Phys. J. Special Topics 224, 13771397 (2015) [pdf]
Emergent vortices in populations of colloidal rollers A. Bricard et al.
Nature Comm. 6, 7470 (2015) [pdf]
Motilityinduced phase separation of active particles in the presence of velocity alignment
Julien Barré, R. Chetrite, M. Muratori, F. Peruani
J. Stat. Phys. 158, 589600 (2015) [pdf]
Diffusion, subdiffusion, and trapping of active particles in heterogeneous media
O. Chepizhko and F. Peruani
Phys. Rev. Lett. 111, 160604 (2013) [pdf]
Dynamics On and Of Complex Networks: Applications to timeVarying Dynamical Systems
A. Mukherjee, M. Choudhury, F. Peruani, N. Ganguly, and B. Mitra, Eds.
Book: Birkäuser (Springer) (2013)
Effect of attachment strategies on bipartite networks
N. Ganguly, S. Saha, A. Maiti, S. Agarwal, F. Peruani, A. Mukherjee,
Eur. Phys. J. B 86, 287 (2013)
A kinetic model and scaling properties for nonequilibrium clustering of selfpropelled particles
F. Peruani and M. Bär
New J. Phys. 15, 065009 (2013) [pdf]
Optimal noise maximizes collective motion in heterogeneous media
O. Chepizhko. E. Altmann, and F. Peruani
Phys. Rev. Lett. 110, 238101 (2013) [pdf]
Fluctuations and the role of collision duration in reactiondiffusion systems
F. Peruani and C.F. Lee
Europhys. Lett. 102, 58001 (2013) [pdf]
Patternformation mechanisms in motility mutants of Myxococcus xanthus
J. Starruss*, F. Peruani*, V. Jakovljevic, L. SoogardAndersen, A. Deutsch, and M. Bär
Interface Focus 2, 774 (2012) [pdf]
Correlations in complex networks under attack
A. Srivastava, B. Mitra, N. Ganguly, and F. Peruani
Phys. Rev. E 86, 036106 (2012)
[pdf]
Collective motion and nonequilibrium cluster formation in colonies of gliding bacteria
F. Peruani, J. Starruss, V. Jakovljevic, L. SogaardAndersen, A. Deutsch, and M. Bär
Phys. Rev. Lett., 108, 098102 (2012)[pdf]
How to detect causality effects on large dynamical communication networks : a case study
L. Tabourier, A. Stoica, and F. Peruani
Proceedings of ComsNets2012, Bengaluru, India. (2012).
Directedness of information flow in mobile phone communication networks
F. Peruani and L. Tabourier
PLoS ONE 6, e28860 (2011) [pdf]
Polar vs. apolar alignment in systems of polar selfpropelled particles
F. Peruani, F. Ginelli, M. Bär, and H. Chaté
J. Phys.: Conf. Ser. 297, 012014 (2011) [pdf]
Attacks on Correlated PeertoPeer Networks: An Analytical Study
A. Srivastava, B. Mitra, F. Peruani, N. Ganguly
SCNC 2011, The First IEEE International Workshop on Security in Computers, Networking and Communications in conjunction with IEEE INFOCOM (2011).
Influence of the motion of individuals on the evolution of a SIRS epidemy
G.J. Sibona, F. Peruani, G.R. Terranova
Proceedings of BIOMAT 2011 International Symp. on Mathematical and Comp. Biology. Ed. R. Mondaini, World Scientific co (2011).
Traffic jams, gliders, and bands in the quest for collective motion
F. Peruani, T. Klauss, A. Deutsch, and A. VossBoehme
Phys. Rev. Lett. 106, 128101 (2011)[pdf]
Cluster dynamics and cluster size distributions in systems of selfpropelled particles
F. Peruani, L. SchimanskyGeier, and M. Bär
Eur. Phys. J. Special Topics 191, 173185 (2010) [pdf]
Largescale collective properties of selfpropelled rods
F. Ginelli, F. Peruani, M. Bär, and H. Chaté
Phys. Rev. Lett. 104, 184502 (2010) [pdf]
Mobility induces global synchronization of oscillators in periodic extended systems
F. Peruani, E.M. Nicola, and L.G. Morelli
New J. Phys. 12, 093029 (2010) [pdf]
Modeling
Broadcasting using Omnidirectional and Directional Antenna in Delay Tolerant
Networks as an Epidemic Dynamics
F. Peruani, A. Maiti, S. Sadhu, H. Chaté, R.R. Choudhury, N. Ganguly
IEEE Journal on Selected Areas in Communication 28, 524531 (2010) [pdf]
Modeling discrete combinatorial systems as Alphabetic Bipartite Networks: Theory and Applications
M. Choudhur, N. Ganguly, A. Maiti, A. Mukherjee, L. Brusch, A. Deutsch, and F. Peruani
Phys. Rev. E 81, 036103 (2010) [pdf]
Advances in Complex Networks
F. Peruani
in: Dynamics on and of Complex Networks: Applications to Biology, Computer Science, Economics, and the Social Sciences; Eds. N. Ganguly, A. Deutsch, and A. Mukherjee, BirkhauserSpringer, Boston (2009)
Modeling
Collective Motion: Variations on the Vicsek model H. Chaté, F. Ginelli, G. Gregoire, F. Peruani, and F. Raynaud
Eur. Phys. J. B 64, 451 (2008) [pdf]
Stability Analysis of PeertoPeer Networks Against Churn B. Mitra, N. Ganguly, S. Ghose, and F. Peruani
Pramana  J. Phys. 71, 263 (2008) [pdf]
Generalized theory for node
disruption in finite complex networks
B. Mitra, N. Ganguly, S. Ghose, and F. Peruani
Phys. Rev. E 78, 026115 (2008) [pdf]
Dynamics and Steady States in Excitable Mobile Agent System
F. Peruani and G. Sibona
Phys. Rev. Lett. 100, 168103 (2008) [pdf]
Mean field theory for the collective motion of
selfpropelled particles interacting by velocity alignment mechanisms
F. Peruani, A. Deutsch, and M. Bär
Eur. Phys. J. Special Topics 157, 111 (2008) [pdf]
Analyzing the Vulnerability of
Superpeers Networks Against Attack B. Mitra, F. Peruani, S. Ghose, and N. Ganguly
proceeding at CCS 07 (14 th ACM Conference
on Computer and Communications Security) (2007)
Selfpropelled particles with fluctuating
speed and direction of motion in two dimensions F. Peruani and L.G. Morelli
Phys. Rev. Lett. 99, 010602 (2007) [pdf]
Measuring robustness of Superpeer
Topologies B. Mitra, F. Peruani, S. Ghose, and N. Ganguly
Brief Announcement at PODC'07 (TwentySixth Annual ACM
SIGACTSIGOPS Symposium on Principles of Distributed Computing) (2007) [pdf]
Emergence of a nonscaling degree distribution in bipartite networks: a
numerical and analytical study F. Peruani, M. Choudhury, A. Mukherjee, and N. Ganguly
Europhys. Lett. 79, 28001 (2007) [pdf]
Bacterial swarming driven by rod shape J. Starruss, F. Peruani, M. Bär, and A. Deutsch
In: Mathematical Modeling of Biological Systems, Volume I: Cellular Biophysics, Regulatory Networks, Development, Biomedicine, and Data Analysis (2007)
Nonequilibrium clustering of selfpropelled rods F. Peruani, A. Deutsch, and M. Bär
Phys. Rev. E, 74, 030904 (2006). Rapid Communications [pdf]
On cell resistance and immune response
time lag in a model for the HIV infection G. Solovey, F. Peruani, S.P. Dawson, and R.M. Zorzenon dos Santos
Physica A, 343, 543 (2004) [pdf]
Dielectric Breakdown model for
conductorloaded and insulator loaded composite materials P. Bergero, F. Peruani, G. Solovey, I.M. Irurzun, J.L. Vicente, and E. E. Mola
Phys. Rev. E, 69, 16123 (2004) [pdf]
Dielectric
breakdown model for composite materials F. Peruani, G. Solovey, I.M. Irurzun, E. E. Mola, A. Marzocca, J.L. Vicente
Phys. Rev. E, 67, 066121 (2003) [pdf]
Theses:
Active Matter and Applications F. Peruani
HDR thesis (2018) [Universitè Nice Sophia Antipolis, member Universitè Côte d'Azur]
From individual to collective motion of selfpropelled particles: the role of particle shape, orientation ordering and clustering F. Peruani
PhD thesis (2008) [Universitäbibliothek der TU Berlin]
Models for the dielectric breakdown F. Peruani
Master thesis (2003)
